CDS

Accession Number TCMCG066C33701
gbkey CDS
Protein Id XP_034572253.1
Location join(6957464..6959528,6959777..6960593,6960769..6961065,6961178..6961394)
Gene LOC117836848
GeneID 117836848
Organism Setaria viridis

Protein

Length 1131aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034716362.1
Definition phytochrome a [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category H
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCCTCGAGGCCTACTCAGTCTTCCACTTCATCCAGCAGGACTCGCCAGAGCTCCCGAGCGAGGATATTAGCACAAACAACCCTTGATGCTGAACTGAATGCTGAGTATGAAGAATCTGGTGATTCCTTTGATTACTCCAAGTTGGTTGAAGCGCAGCGGACTGCTCCACCTGAGCAGCAAGGGCGTTCAGAGAAGGTCATAGCCTACTTGCAGCACATTCAGAGAGGAAAGCTAATCCAACCATTTGGTTGCTTGTTGGCCCTTGATGAGAAGAGCTTCCGGGTCATTGCATTCAGTGAGAATGCTCCAGAAATGCTTACAACAGTCAGCCATGCCGTGCCTAATGTTGATGGTCCCCCAAAGTTAGGAATTGGCACCAATGTGCGCTCCCTTTTCACTGACCCTGGTGCCACAGCACTGCAGAAGGCACTAGGATTTGCTGACGTTTCTTTGCTGAATCCTATTCTAGTTCAATGCAAGACCTCAGGCAAGCCATTCTATGCCATTGTTCATAGGGCAACTGGTTGTCTGGTGGTGGATTTTGAGCCTGTGAAACCTACAGAATTTCCTGCCACTGCTGCTGGGGCTTTGCAGTCTTACAAGCTTGCTGCTAAGGCAATCTCCAAGATCCAGTCACTACCAGGTGGGAGCATGGAGGCCTTATGCAATACTGTGGTTAAGGAAGTCTTTGACCTTACAGGTTACGACAGGGTTATGGCTTACAAGTTCCACGAAGATGAGCATGGGGAGGTCTTTGCCGAGATCACAAAACCTGGTATTGAGCCTTATCTTGGCCTTCACTATCCGGCCACTGATATCCCTCAAGCTGCCAGGTTTCTTTTCATGAAGAACAAAGTACGAATGATCTGTGATTGTCGTGCAAGATCTGTGAAGATTATTGAAGACGAGGCACTCTCCATTGATATTAGCTTGTGTGGTTCAACTCTTAGAGCACCACACAGTTGTCACCTTCAGTATATGGAGAACATGAACTCAATTGCATCCCTTGTCATGGCTGTTGTGGTCAATGAAAATGAAGAAGATGATGAACCCGAGCCTGAGCAACCACCACAGCAGCAGAAGAAGAAGAGGCTGTGGGGTCTCATTGTTTGCCACCATGAGAGCCCCAGATATGTCCCGTTTCCACTGCGCTATGCTTGTGAATTCTTAGCACAAGTGTTTGCTGTCCATGTCAACAAGGAGTTTGAATTAGAGAAGCAGATACGAGAGAAAAGCATTCTACGAATGCAAACAATGCTCTCTGACATGCTATTCAGGGAAGCATCTCCCTTGAGTATCATATCTGGGAGTCCAAATATCATGGACCTAGTTAGATGTGATGGTGCTGCTCTTTTGTATGGGGACAAAGTATGGCGCCTCCAAACGGCTCCAACTGAGTCTCAGATACGTGATATTGCTTTCTGGCTTTCAGAAGTTCATAGGGATTCCACTGGCTTGAGTACTGACAGCCTCCAGGATGCTGGATATCCAGGAGCTGCCTCCCTTGGTGACATGATTTGTGGAATGGCAGTGGCTAAGATAACTTCCAAGGATGTTCTTTTCTGGTTCAGGTTACATACAGCTGCTGAAATCAAATGGGGAGGTGCAAAGCATGATCCATCTGATAAGGACGACAACAGAAGGATGCACCCAAGGTTGTCCTTCAAGGCATTCCTTGAGGTTGTCAAGATGAAGAGTTTGCCATGGAATGACTATGAGATGGATGCTATTCACTCATTGCAACTTATACTTAGAGGTACACTGACTGATGCCATGAAGCCGGCCCGGACATCTGTTTTAGATAACCAGATTGGTGACCTCAAACTTGATGGGCTTGCTGAATTGCAGGCAGTGACAAGTGAAATGGTTCGCCTAATGGAAACAGCAACTGTTCCGATCTTGGCAGTAGATGGCAATGGATTGGTCAATGGATGGAATCAAAAGGTAGCAGAATTGACGGGATTGAGAGTTGATGAGGCTATAGGAAGACACATACTTACACTTGTGGAGGATTCTTCTGTATCAACTGTTCAGAGGATGCTATACTTAGCTCTACAGGGCAGAGAAGAGAAGGAGGTTCGGTTTGAGTTGAAAACACATGGCTCCAAGAGGGATGATGGCCCTGTTATCTTGGTTGTAAATGCTTGTGCCAGTCGTGACCTTCATGACCACGTTGTTGGGGTGTGCTTTGTAGCCCAAGATATGACTGTTCATAAGTTGGTCATGGATAAATTCACTCGTGTTGAAGGGGACTACAAGGCAATCGTTCACAACCCGAACCCACTCATTCCTCCCATATTTGGTGCTGACCAATTTGGGTGGTGCTCTGAGTGGAATGCAGCCATGACCAAGCTTACTGGGTGGCACAGAGATGATGTGATTGATAAGATGCTCCTTGGTGAGGTTTTTGATAGCAGCAATGCTTCATGCCTTTTGAAGAACAAAGACGCATTTGTGCATCTCTGCATCATCATCAACAGTGCATTAGCCGGTGACGAGGCAGAAAAGGCTCCATTTGGCTTCTTTGACCGGAATGGGAAGTACATTGAGTGTCTTCTTTCAGTGAACAGAAAAGTAAATGCAGATGGTGTTGTCACCGGAGTGTTCTGTTTCATTCATGTTCCTAGTGATGAGCTGCAGCATGCACTACATGTGCAGCAAGCCTCGGAGCAGACAGCAGTAAGGAGGTTGAAGGCTTTCTCGTACATGCGACATGCCATAAACAAACCTCTCTCAGGTATGCTTTATTCTAGGGAAGCGCTCAAGAGCACAGGTCTGAATGAAGAGCAGATGAGGCAGGTCCATGTCGCGGATAGTTGTCATCACCAGCTAAACAAGATACTTACCGACTTGGATCAAGATAACATAACTGACAAGTCAAGTAGTTTGGATTTGGATATGGCTGAATTTGTGTTGCAAGATGTGGTGGTGGCTGCAGTCAGTCAAGTACTGATAGGTTGCCAGGGTAAAGGGATCAGAGTTTCTTGCAATCTGCCAGAGAGATTCATGAAGCAAAAAGTGTACGGCGATGGTATTCGGCTCCAGCAGATCCTCTCTGACTTCCTATTTGTTTCAGTGAAGTTCTCTCCTGTTGGAGGTTCTGTTGATATCTCTTCCAAACTGACTAAGAACAGCATTGGAGAAAATCTCCATCTCATAGACCTGGAGCTAAGCATAAAGCAGCAGGGAACAGGAGTCCCAGCAGAAATAATATCACAAATGTATGAGGAGGAGAATAAGGAACAATCAGAAGAGGGCTTGAGCCTTCTTGTTTCTAGAAACCTTCTGAGGCTCATGAATGGTGATATTCGTCACATGAGGGAAGCTGGCATGTCAACATTCATCCTTACCGCTGAACTTGCCTCTGCCCCTACCGCCCCTGGACAATGA
Protein:  
MSSSRPTQSSTSSSRTRQSSRARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRTAPPEQQGRSEKVIAYLQHIQRGKLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDGPPKLGIGTNVRSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFREASPLSIISGSPNIMDLVRCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHRDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDVLFWFRLHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLTDAMKPARTSVLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELTGLRVDEAIGRHILTLVEDSSVSTVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIVHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDDVIDKMLLGEVFDSSNASCLLKNKDAFVHLCIIINSALAGDEAEKAPFGFFDRNGKYIECLLSVNRKVNADGVVTGVFCFIHVPSDELQHALHVQQASEQTAVRRLKAFSYMRHAINKPLSGMLYSREALKSTGLNEEQMRQVHVADSCHHQLNKILTDLDQDNITDKSSSLDLDMAEFVLQDVVVAAVSQVLIGCQGKGIRVSCNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISSKLTKNSIGENLHLIDLELSIKQQGTGVPAEIISQMYEEENKEQSEEGLSLLVSRNLLRLMNGDIRHMREAGMSTFILTAELASAPTAPGQ